6JDE
crystal structure of a DNA repair protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.978 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.515, 78.455, 110.587 |
Unit cell angles | 90.00, 98.50, 90.00 |
Refinement procedure
Resolution | 19.953 - 2.800 |
R-factor | 0.2289 |
Rwork | 0.228 |
R-free | 0.24020 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.962 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | AutoSol |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.880 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmeas | 0.105 | 0.616 |
Number of reflections | 33119 | |
<I/σ(I)> | 14.4 | |
Completeness [%] | 97.8 | |
Redundancy | 6.2 | |
CC(1/2) | 0.990 | 0.970 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 18% PEG3350, 500mM Nacl |