6JDE
crystal structure of a DNA repair protein
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-11-20 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.978 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 80.515, 78.455, 110.587 |
| Unit cell angles | 90.00, 98.50, 90.00 |
Refinement procedure
| Resolution | 19.953 - 2.800 |
| R-factor | 0.2289 |
| Rwork | 0.228 |
| R-free | 0.24020 |
| Structure solution method | SAD |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.962 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | AutoSol |
| Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 2.880 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Rmeas | 0.105 | 0.616 |
| Number of reflections | 33119 | |
| <I/σ(I)> | 14.4 | |
| Completeness [%] | 97.8 | |
| Redundancy | 6.2 | |
| CC(1/2) | 0.990 | 0.970 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 18% PEG3350, 500mM Nacl |






