6IW7
structural insights into Mycobacterium tuberculosis ClpP1P2 inhibition by Cediranib: implications for developing antimicrobial agents targeting Clp protease
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 210.634, 180.780, 95.926 |
Unit cell angles | 90.00, 95.72, 90.00 |
Refinement procedure
Resolution | 29.699 - 2.692 |
R-factor | 0.193049314558 |
Rwork | 0.192 |
R-free | 0.24870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dzk |
RMSD bond length | 0.012 |
RMSD bond angle | 1.079 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.025 |
High resolution limit [Å] | 2.692 | 2.692 |
Number of reflections | 96900 | 9595 |
<I/σ(I)> | 8.04 | |
Completeness [%] | 98.6 | |
Redundancy | 4.9 | |
CC(1/2) | 0.376 | 0.986 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 1.5 M Ammonium sulphate and 0.1 M MES pH 6.5 |