6IUP
Crystal structure of FGFR4 kinase domain in complex with compound 5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-11-02 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.400, 61.150, 61.400 |
Unit cell angles | 90.00, 99.22, 90.00 |
Refinement procedure
Resolution | 32.118 - 2.000 |
R-factor | 0.1724 |
Rwork | 0.169 |
R-free | 0.22770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4qqt |
RMSD bond length | 0.007 |
RMSD bond angle | 0.843 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX (v1.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.118 | 32.118 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.070 | 0.024 | 0.297 |
Rmeas | 0.094 | 0.032 | 0.392 |
Total number of observations | 87038 | ||
Number of reflections | 40623 | 440 | 3031 |
<I/σ(I)> | 10.38 | 31.92 | 2.88 |
Completeness [%] | 98.7 | 93.6 | 98.9 |
Redundancy | 2.143 | 2.202 | 2.133 |
CC(1/2) | 0.994 | 0.998 | 0.854 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.1M MES pH5.5, 0.2M Li2SO4, 18% PEG3350 |