6IUL
Crystal structure of Lamprey immune protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9798 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 103.257, 103.257, 166.209 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.000 - 2.250 |
R-factor | 0.2 |
Rwork | 0.198 |
R-free | 0.23150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nzo |
RMSD bond length | 0.014 |
RMSD bond angle | 1.496 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.000 | 45.000 | 2.290 |
High resolution limit [Å] | 2.250 | 6.100 | 2.250 |
Rmerge | 0.147 | 0.119 | 0.644 |
Rmeas | 0.152 | 0.123 | 0.664 |
Rpim | 0.038 | 0.033 | 0.162 |
Number of reflections | 43291 | 2387 | 2116 |
<I/σ(I)> | 6.7 | ||
Completeness [%] | 99.9 | 99.6 | 100 |
Redundancy | 16 | 13.8 | 16.3 |
CC(1/2) | 0.993 | 0.929 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 289 | 2% 1,4-Dioxane, 10% w/v Polyethylene glycol 2000, 0.1M BICINE |