6IRW
Crystal structure of the human cap-specific adenosine methyltransferase bound to SAH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.215, 120.379, 156.946 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.989 - 2.900 |
R-factor | 0.209 |
Rwork | 0.208 |
R-free | 0.23610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6irx |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.2) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.990 | 47.990 | 3.060 |
High resolution limit [Å] | 2.900 | 9.170 | 2.900 |
Rmerge | 0.117 | 0.040 | 0.682 |
Rmeas | 0.127 | 0.043 | 0.738 |
Rpim | 0.049 | 0.018 | 0.282 |
Total number of observations | 202713 | ||
Number of reflections | 30286 | 1077 | 4338 |
<I/σ(I)> | 10.6 | ||
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 6.7 | 5.9 | 6.8 |
CC(1/2) | 0.998 | 0.998 | 0.912 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 9% PEG 3350, 0.2M sodium nitrate, 0.1M bis-Tris propane |