6IBD
The Phosphatase and C2 domains of Human SHIP1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.889, 80.076, 90.273 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.900 - 1.480 |
R-factor | 0.17385 |
Rwork | 0.173 |
R-free | 0.20054 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5okm |
RMSD bond length | 0.012 |
RMSD bond angle | 1.791 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.080 | 1.510 |
High resolution limit [Å] | 1.480 | 1.480 |
Rmerge | 0.187 | 3.948 |
Rmeas | 0.197 | 4.289 |
Rpim | 0.062 | 1.639 |
Number of reflections | 76674 | 3736 |
<I/σ(I)> | 11.4 | 1.2 |
Completeness [%] | 100.0 | 99.3 |
Redundancy | 19.4 | 13.3 |
CC(1/2) | 0.997 | 0.385 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1 M bis-tris, 14% (w/v) PEG 2000 MME, 12% (w/v) PEG 3350 |