6I3C
Crystal structure of Human soluble catechol O-methyltransferase in complex with 3,5-dinitrocatechol and S-adensoyl-L-methionine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-10 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9282 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.694, 61.749, 46.071 |
Unit cell angles | 90.00, 116.42, 90.00 |
Refinement procedure
Resolution | 39.130 - 1.336 |
R-factor | 0.1355 |
Rwork | 0.134 |
R-free | 0.17020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse |
RMSD bond length | 0.018 |
RMSD bond angle | 1.270 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3304: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.130 | 1.384 |
High resolution limit [Å] | 1.336 | 1.336 |
Rmerge | 0.081 | 0.360 |
Rmeas | 0.097 | 0.450 |
Rpim | 0.053 | 0.270 |
Number of reflections | 49463 | 4891 |
<I/σ(I)> | 8.25 | 2.06 |
Completeness [%] | 99.5 | 99.15 |
Redundancy | 3.2 | 2.5 |
CC(1/2) | 0.994 | 0.824 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.4 | 277 | 0.2M 1,6-Hexanediol; 0.2M 1-Butanol; 0.2M 1,2-Propanediol; 0.2M 2-Propanol; 0.2M 1,4-Butanediol; 0.2M 1,3-Propanediol), 0.1M Imidazole; MES monohydrate (acid) pH 6.5, 50% v/v pre-cipitant mix (25% v/v MPD; 25% PEG 1000; 25% PEG 3350) Morpheus condition D4 |