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6HYM

Structure of PCM1 LIR motif bound to GABARAP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-16
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9282
Spacegroup nameP 43
Unit cell lengths80.873, 80.873, 55.190
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.587 - 1.860
R-factor0.1871
Rwork0.185
R-free0.21750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1gnu
RMSD bond length0.019
RMSD bond angle1.232
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.5901.920
High resolution limit [Å]1.8601.860
Rmerge0.0200.780
Rmeas0.0200.890
Rpim0.0100.420
Number of reflections301313045
<I/σ(I)>19.71.3
Completeness [%]99.597.7
Redundancy4.74.3
CC(1/2)1.0000.650
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29325% w/v PEG 1500, 0.1 M SPG pH 8.5

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