6HXG
PDX1.2/PDX1.3 complex (intermediate)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-19 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | H 3 |
Unit cell lengths | 177.976, 177.976, 116.855 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 93.120 - 1.900 |
R-factor | 0.2171 |
Rwork | 0.216 |
R-free | 0.23140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Chainsaw model derived from 5K3V |
RMSD bond length | 0.003 |
RMSD bond angle | 0.687 |
Data reduction software | MOSFLM (7.2.0) |
Data scaling software | Aimless (7.0.013) |
Phasing software | PHASER (7.0.013) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 93.120 | 1.870 |
High resolution limit [Å] | 1.840 | 1.840 |
Rmerge | 0.126 | 2.143 |
Rmeas | 0.149 | 2.639 |
Rpim | 0.087 | 1.502 |
Number of reflections | 119464 | 5824 |
<I/σ(I)> | 8.1 | 0.9 |
Completeness [%] | 99.4 | 97.4 |
Redundancy | 6.8 | 5.2 |
CC(1/2) | 0.997 | 0.085 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.8 M ammonium sulphate, 0.05 M MES.OH, pH 6.5, 5% 1,4-dioxane, 0.013 M ammonium sulphate, 0.003 M R5P, 0.001 M G3P, 0.02 M Tris.HCl, pH 8.0, 0.1 M KCl, 0.005 M DTT |