6HU0
Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97779 |
Spacegroup name | P 1 |
Unit cell lengths | 70.690, 70.730, 98.120 |
Unit cell angles | 75.51, 78.08, 85.55 |
Refinement procedure
Resolution | 47.993 - 1.746 |
R-factor | 0.1907 |
Rwork | 0.189 |
R-free | 0.22630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bz5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.846 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.000 | 1.809 |
High resolution limit [Å] | 1.746 | 1.746 |
Rmerge | 0.126 | 0.600 |
Number of reflections | 175146 | 16560 |
<I/σ(I)> | 13.94 | 2.2 |
Completeness [%] | 95.8 | 90.4 |
Redundancy | 3.3 | 3.2 |
CC(1/2) | 0.989 | 0.826 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M NA,K L-TARTRATE, 21% (W/V) PEG3350 |