6HTH
Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 1 |
Unit cell lengths | 70.520, 70.555, 98.232 |
Unit cell angles | 78.36, 75.84, 85.74 |
Refinement procedure
Resolution | 46.757 - 1.950 |
R-factor | 0.2128 |
Rwork | 0.210 |
R-free | 0.25720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bz5 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.364 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.757 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.174 | 0.779 |
Number of reflections | 125331 | 12675 |
<I/σ(I)> | 4.18 | 1.38 |
Completeness [%] | 95.6 | 96.45 |
Redundancy | 2.8 | 2.8 |
CC(1/2) | 0.977 | 0.408 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M NA,K L-TARTRATE, 21% (W/V) PEG3350 |