6HRQ
Crystal structure of Schistosoma mansoni HDAC8 complexed with NCC-149
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 71.430, 71.480, 99.260 |
Unit cell angles | 78.11, 75.54, 85.37 |
Refinement procedure
Resolution | 47.158 - 1.845 |
R-factor | 0.1515 |
Rwork | 0.150 |
R-free | 0.18320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bz5 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.832 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.900 |
High resolution limit [Å] | 1.845 | 1.845 |
Rmerge | 0.054 | 0.690 |
Number of reflections | 152133 | 14354 |
<I/σ(I)> | 15.4 | 1.78 |
Completeness [%] | 95.1 | 89.64 |
Redundancy | 3.5 | 3.3 |
CC(1/2) | 0.999 | 0.659 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M NA,K L-TARTRATE, 21% (W/V) PEG3350 |