6HOZ
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with inosine diphosphate ribose (IDPr)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9762 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.844, 96.933, 107.519 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.100 - 1.770 |
R-factor | 0.15963 |
Rwork | 0.158 |
R-free | 0.18872 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2foz |
RMSD bond length | 0.012 |
RMSD bond angle | 1.512 |
Data reduction software | XDS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 96.950 | 1.820 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.120 | 1.896 |
Rmeas | 0.130 | 2.108 |
Rpim | 0.051 | 0.912 |
Number of reflections | 68856 | 5010 |
<I/σ(I)> | 10.9 | 1.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.5 | 10.2 |
CC(1/2) | 0.999 | 0.745 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 200 MM AMMONIUM ACETATE, 21 % PEG4000, 100 MM CITRATE PH 4.5, |