6HOI
Structure of Beclin1 LIR motif bound to GABARAPL1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 31.990, 54.000, 138.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.161 - 1.140 |
R-factor | 0.1459 |
Rwork | 0.145 |
R-free | 0.16570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2r2q |
RMSD bond length | 0.009 |
RMSD bond angle | 1.143 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.161 | 1.180 |
High resolution limit [Å] | 1.140 | 1.140 |
Rmerge | 0.030 | 0.640 |
Rmeas | 0.030 | 0.780 |
Rpim | 0.010 | 0.440 |
Number of reflections | 88324 | 8545 |
<I/σ(I)> | 18.2 | 1.7 |
Completeness [%] | 99.3 | 97.51 |
Redundancy | 4.1 | 2.8 |
CC(1/2) | 0.990 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M sodium acetate, 0.1M Hepes pH 7.5, 12% PEG 4000 |