6HMV
Crystal structure of human ACBD3 GOLD domain in complex with 3A protein of enterovirus-D68 (fusion protein, LVVY mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.432, 59.165, 85.902 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.450 - 2.244 |
R-factor | 0.2323 |
Rwork | 0.231 |
R-free | 0.26520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lz1 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.844 |
Data reduction software | XDS (11-Sep-2018) |
Data scaling software | XDS (11-Sep-2018) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.450 | 2.324 |
High resolution limit [Å] | 2.244 | 2.244 |
Rmerge | 0.087 | 1.082 |
Rmeas | 0.094 | |
Number of reflections | 13960 | 1332 |
<I/σ(I)> | 12.81 | 1.52 |
Completeness [%] | 99.2 | 95.42 |
Redundancy | 7.1 | 6.9 |
CC(1/2) | 0.995 | 0.750 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 12.5% w/v PEG 1000, 12.5% w/v PEG 3350, 12.5% v/v MPD, 30 mM MgCl2, 30 mM CaCl2, 100 mM bicine/Tris pH 8.5 |