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6HML

POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00017299

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2013-08-01
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths67.310, 90.190, 95.990
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.310 - 2.250
R-factor0.1639
Rwork0.162
R-free0.19650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4a0d
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.5)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.3102.310
High resolution limit [Å]2.2502.250
Rmerge0.0830.758
Number of reflections28396
<I/σ(I)>15.22.7
Completeness [%]99.999.9
Redundancy6.46.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293Mix 750 nL purified protein at 7.5 mg per mL in 50mM HEPES, pH 7.0, 150 mM NaCl, 2mM DTT with 250 nL of seed stock and 1000 nL of a precipitant consisting of 18-23 percent PEG 3350, 0.2 M ammonium sulphate, 0.1 M PCTP pH 7.5. Seed stock was prepared using a Seed Bead from a co-crystal with ADP-ribose, with co-crystallisation mother liquor (19 percent PEG 3350, 0.2 M ammonium sulphate, 0.1 M PCTP pH 7.5) as the stabilising solution

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PDB entries from 2024-05-01

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