6HHO
Crystal structure of RIP1 kinase in complex with GSK547
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 102.649, 130.370, 50.839 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.030 - 3.490 |
R-factor | 0.209 |
Rwork | 0.208 |
R-free | 0.22700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ith |
RMSD bond length | 0.010 |
RMSD bond angle | 1.190 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.12) |
Refinement software | BUSTER |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 80.650 | 80.650 | 3.820 |
High resolution limit [Å] | 3.490 | 8.550 | 3.490 |
Rmerge | 0.131 | 0.051 | 0.639 |
Rmeas | 0.145 | 0.057 | 0.709 |
Rpim | 0.061 | 0.024 | 0.299 |
Total number of observations | 46855 | ||
Number of reflections | 8924 | 647 | 2087 |
<I/σ(I)> | 7.7 | ||
Completeness [%] | 97.7 | 94.4 | 97 |
Redundancy | 5.3 | 5 | 5.2 |
CC(1/2) | 0.996 | 0.997 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 25mM Tris HCl, 150mM NaCl, 1mM DTT, 10% glycerol, pH7.5 and 4mM GSK547 |