6HHG
Crystal Structure of AKT1 in Complex with Covalent-Allosteric AKT Inhibitor 27
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.99991 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 70.820, 71.230, 91.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.620 - 2.300 |
R-factor | 0.2121 |
Rwork | 0.210 |
R-free | 0.24610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3o96 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.548 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.620 | 2.400 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.126 | 1.380 |
Rmeas | 0.128 | 1.460 |
Number of reflections | 21089 | 2459 |
<I/σ(I)> | 12.86 | 1.37 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 12 | 7.7 |
CC(1/2) | 0.998 | 0.599 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 1.25 mM Na-acetate, 3.75 mM Na-citrate, 15% v/v PEG 2000 MME, pH 7.5, 3 mg/mL Akt1 (in 25 mM TRIS, 100 mM NaCl, 10 % Glycerol, 5 mM DTT, pH 7.5), 1 uL reservoir + 1 uL protein solution |