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6H3U

Schmallenberg Virus Glycoprotein Gc Head Domain in Complex with scFv 4B6

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-24
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.980097
Spacegroup nameP 31 2 1
Unit cell lengths175.842, 175.842, 153.684
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.554 - 3.168
R-factor0.2019
Rwork0.200
R-free0.22840
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6H3T along with a Phyre2-generated model of the scFv 4B6 antibody fragment
RMSD bond length0.004
RMSD bond angle0.759
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5543.610
High resolution limit [Å]3.1683.170
Rmerge0.2201.780
Rmeas0.2301.820
Rpim0.0500.410
Number of reflections277741391
<I/σ(I)>11.42
Completeness [%]59.19.3
Redundancy20.918.7
CC(1/2)1.0000.720
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291.150.75 uL of a 22.8 mg/mL solution of the GPC-purified complex in 20 mM Tris-Cl pH 8.0, 150 mM NaCl were added to 0.75 uL of reservoir solution containing 0.1 M sodium acetate pH 4.6, 3.5 M sodium formate

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