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6H1V

The crystal structure of Pol2CORE in complex with DNA and an incoming nucleotide, carrying an Fe-S cluster

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]90
Detector technologyPIXEL
Collection date2017-07-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.98400
Spacegroup nameC 1 2 1
Unit cell lengths148.210, 70.040, 149.930
Unit cell angles90.00, 109.43, 90.00
Refinement procedure
Resolution19.990 - 2.700
R-factor0.24
Rwork0.239
R-free0.26590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4m8o
Data reduction softwareMOSFLM
Data scaling softwareAimless (0.6.2)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]73.04073.0402.810
High resolution limit [Å]2.7009.7402.700
Rmerge0.1520.0591.654
Rmeas0.1860.0732.046
Rpim0.1060.0431.188
Number of reflections395439024395
<I/σ(I)>5.1
Completeness [%]98.698.497.5
Redundancy2.92.72.7
CC(1/2)0.9720.9450.144
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729120% PEG-3350, 50 mM Hepes-NaOH pH 7.0, 10 mM MgCl2, 400 mM LiAc, and 10 mM 2-aminoethanesulfonic acid (taurine)
1VAPOR DIFFUSION, HANGING DROP729120% PEG-3350, 50 mM Hepes-NaOH pH 7.0, 10 mM MgCl2, 400 mM LiAc, and 10 mM 2-aminoethanesulfonic acid (taurine)

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PDB entries from 2024-10-30

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