6GX3
Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 1 |
Unit cell lengths | 70.449, 70.670, 98.413 |
Unit cell angles | 75.71, 78.40, 85.55 |
Refinement procedure
Resolution | 47.888 - 2.100 |
R-factor | 0.1918 |
Rwork | 0.189 |
R-free | 0.23950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4bz5 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.004 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_1702) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.270 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 102449 | |
<I/σ(I)> | 4.79 | |
Completeness [%] | 93.4 | |
Redundancy | 1.76 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M NA,K L-TARTRATE 21% (W/V) PEG3350 |