6GQE
X-ray structure of KH1-2 domain of IMP3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000009 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.200, 58.090, 60.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.020 - 2.150 |
R-factor | 0.23976 |
Rwork | 0.233 |
R-free | 0.29273 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ann |
RMSD bond length | 0.007 |
RMSD bond angle | 1.251 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | Auto-Rickshaw |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.210 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.084 | 0.800 |
Number of reflections | 7366 | |
<I/σ(I)> | 11.94 | 1.63 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 6.5 | 6.9 |
CC(1/2) | 0.999 | 0.767 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 292 | 0.08 M magnesium acetate, 0.05 M sodium cacodylate pH 6.5, 30% w/v Polyethylene glycol 4,000 |