6GD8
Cytochrome c in complex with Sulfonato-calix[8]arene, P31 form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-09 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.980 |
Spacegroup name | P 31 |
Unit cell lengths | 66.680, 66.680, 142.881 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 57.750 - 2.500 |
R-factor | 0.1772 |
Rwork | 0.176 |
R-free | 0.19980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5LYC chain A |
RMSD bond length | 0.008 |
RMSD bond angle | 1.375 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.440 | 71.440 | 2.600 |
High resolution limit [Å] | 2.500 | 9.010 | 2.500 |
Rmerge | 0.131 | 0.056 | 0.390 |
Rmeas | 0.158 | 0.067 | 0.470 |
Rpim | 0.086 | 0.036 | 0.259 |
Number of reflections | 24569 | 536 | 2759 |
<I/σ(I)> | 5.7 | ||
Completeness [%] | 99.7 | 99.7 | 99.9 |
Redundancy | 3.1 | 3.1 | 3.1 |
CC(1/2) | 0.984 | 0.992 | 0.607 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 24 % PEG 3350 0.27 M NaCl 0.09 M MES pH 5.5 (2x protein solution : 1x crystallisation condition) |