6GB1
Crystal structure of the GLP1 receptor ECD with Peptide 11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.999920 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 55.550, 55.550, 138.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.570 - 2.730 |
R-factor | 0.208 |
Rwork | 0.205 |
R-free | 0.26200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3c59 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.180 |
Data reduction software | XDS ((VERSION November 3) |
Data scaling software | autoPROC ((Version 1.1.6)) |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.570 | 2.870 |
High resolution limit [Å] | 2.730 | 2.730 |
Rmerge | 0.075 | 1.096 |
Number of reflections | 6336 | |
<I/σ(I)> | 22 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12 | 12.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 292 | A 6-fold excess of peptide 11 was dissolved in a solution of 12 mg/ml GLP1R-ECD in 10 mM Tris buffer pH 7.5, 100 mM NaSulfate and 2% glycerol. 100 nl of this protein solution plus 100 nl reservoir solution were equilibrated against reservoir solution consisting of 10 mM CoCl2, 9.4 % (v/v) 1,6-hexanediol and 100 mM NaAcetate, pH 4.8. Crystals appeared after about one week. |