6FVM
Mutant DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-26 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 |
Unit cell lengths | 34.336, 78.653, 80.182 |
Unit cell angles | 113.26, 97.82, 95.97 |
Refinement procedure
Resolution | 66.302 - 1.631 |
R-factor | 0.1821 |
Rwork | 0.180 |
R-free | 0.21920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ok7 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.966 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.266 | 72.266 | 1.659 |
High resolution limit [Å] | 1.631 | 4.426 | 1.631 |
Rmerge | 0.084 | 0.035 | 1.191 |
Rmeas | 0.092 | 0.038 | 1.418 |
Rpim | 0.035 | 0.014 | 0.751 |
Number of reflections | 64980 | 4688 | 77 |
<I/σ(I)> | 13.2 | 41 | 1.1 |
Completeness [%] | 87.6 | 99.9 | 31.6 |
Redundancy | 6.6 | 6.9 | 3.4 |
CC(1/2) | 0.999 | 0.999 | 0.308 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | MES 50mM pH 6, CaCl2 50mM, PEG400 28%+ Hampton Research PEG Ion kit B3 (1 microliter): 0.2M lithium nitrate, 20% PEG 3350 pH 7.1 |