Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FVL

DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-26
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.0
Spacegroup nameP 1
Unit cell lengths72.900, 79.480, 85.317
Unit cell angles65.83, 75.16, 75.79
Refinement procedure
Resolution57.055 - 1.975
R-factor0.191
Rwork0.189
R-free0.23320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ok7
RMSD bond length0.007
RMSD bond angle1.026
Data reduction softwareXDS
Data scaling softwareautoPROC
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]57.05557.0552.010
High resolution limit [Å]1.9755.3611.975
Rmerge0.0890.0310.706
Rmeas0.1050.0370.993
Rpim0.0550.0270.697
Number of reflections765335808192
<I/σ(I)>1132.61.1
Completeness [%]87.699.225.9
Redundancy3.53.5
CC(1/2)0.9970.9990.234
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION293MES 50mM pH 6, CaCl2 50mM PEG400 30% (1 microliter) + Hampton Research PEG Ion kit E6 (1 microliter): 0.2M sodium malonate pH6, 20% PEG 3350

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon