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6FS9

Influenza B/Memphis/13/03 endonuclease with I38T mutation with bound inhibitor, baloxavir acid (BXA)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-18
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.966
Spacegroup nameI 41
Unit cell lengths63.710, 63.710, 125.410
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.800 - 2.280
R-factor0.18177
Rwork0.179
R-free0.23541
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB:5FML
RMSD bond length0.016
RMSD bond angle1.824
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.8002.340
High resolution limit [Å]2.2802.280
Number of reflections10663
<I/σ(I)>16.12.37
Completeness [%]93.5
Redundancy4.4
CC(1/2)0.9990.899
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Protein, at 15-17 mg/ml, was incubated with 10-fold molar excess of BXA for 30 min at RT, mixtures were centrifuged at RT for 5 minutes at 12000 g, and soluble fraction was used for crystallization trials (final protein concentration 8-10 mg/ml). Mother liquor was 0.2 M CaCl2, 0.1 M MES pH 6.0, 20% (w/v) PEG6000

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