6FNL
Crystal Structure of Ephrin B4 (EphB4) Receptor Protein Kinase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918400 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.138, 54.061, 62.119 |
Unit cell angles | 90.00, 110.87, 90.00 |
Refinement procedure
Resolution | 43.112 - 1.269 |
R-factor | 0.1968 |
Rwork | 0.197 |
R-free | 0.21350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vwu |
RMSD bond length | 0.007 |
RMSD bond angle | 0.834 |
Data reduction software | XDS (XDSapp 2) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.112 | 1.340 |
High resolution limit [Å] | 1.269 | 1.269 |
Rmeas | 0.069 | |
Number of reflections | 74570 | 11399 |
<I/σ(I)> | 12.14 | 0.23 |
Completeness [%] | 97.8 | 93.1 |
Redundancy | 6.69 | 6.4 |
CC(1/2) | 0.999 | 0.126 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 25 % PEG5000 MME, 15 % Glycerol, 0.1 M TRIS pH7.5 |