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6FIO

DDR1, 2-[1'-(1H-indazole-5-carbonyl)-4-methyl-2-oxospiro[indole-3,4'-piperidine]-1-yl]-N-(2,2,2-trifluoroethyl)acetamide, 1.990A, P6522, Rfree=27.7%

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-06-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00000
Spacegroup nameP 65 2 2
Unit cell lengths111.908, 111.908, 113.288
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.458 - 1.990
R-factor0.217
Rwork0.214
R-free0.27650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.007
RMSD bond angle1.007
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_2067)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4602.090
High resolution limit [Å]1.9901.990
Rmerge0.2361.062
Rmeas0.3270.029
Total number of observations557871
Number of reflections29121411
<I/σ(I)>8.650.47
Completeness [%]99.398.6
Redundancy19.0918.38
CC(1/2)0.9991.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529311.3 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed 1.3:1 with 90mM MES/NaOH pH6.5, 0.18M potassium iodide, 0.2M Li2SO4, 22.5% PEG 4K

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PDB entries from 2024-07-17

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