Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FIN

DDR1, 3-[(3-cyclopropyl-1,2,4-oxadiazol-5-yl)methyl]-8-(1H-indazole-5-carbonyl)-1-phenyl-1,3,8-triazaspiro[4.5]decan-4-one, 1.670A, P1211, Rfree=22.8%

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-02-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00000
Spacegroup nameP 1 21 1
Unit cell lengths40.960, 62.120, 63.990
Unit cell angles90.00, 106.74, 90.00
Refinement procedure
Resolution43.625 - 1.670
R-factor0.1995
Rwork0.198
R-free0.22790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.008
RMSD bond angle1.092
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_1931)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.6301.910
High resolution limit [Å]1.8101.810
Rmerge0.0510.456
Rmeas0.0630.035
Total number of observations119011
Number of reflections28062421
<I/σ(I)>13.22.1
Completeness [%]99.698.9
Redundancy3.373.16
CC(1/2)0.9990.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529311.3 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed 1.3:1 with 90mM MES/NaOH pH6.5, 0.18M potassium iodide, 0.2M Li2SO4, 22.5% PEG 4K

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon