6FIL
DDR1, 2-[8-(1H-indazole-5-carbonyl)-4-oxo-1-phenyl-1,3,8-triazaspiro[4.5]decan-3-yl]-N-methylacetamide, 1.730A, P212121, Rfree=24.5%
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.042, 74.750, 75.080 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.826 - 1.730 |
R-factor | 0.195 |
Rwork | 0.192 |
R-free | 0.24540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.007 |
RMSD bond angle | 1.071 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1730) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.830 | 1.830 |
High resolution limit [Å] | 1.730 | 1.730 |
Rmerge | 0.087 | 0.832 |
Rmeas | 0.098 | 0.023 |
Total number of observations | 226174 | |
Number of reflections | 34598 | 491 |
<I/σ(I)> | 11.27 | 1.1 |
Completeness [%] | 93.0 | 99.4 |
Redundancy | 5.74 | 6.53 |
CC(1/2) | 0.999 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 11.3 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed 1.3:1 with 90mM MES/NaOH pH6.5, 0.18M potassium iodide, 0.2M Li2SO4, 22.5% PEG 4K |