Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6FIL

DDR1, 2-[8-(1H-indazole-5-carbonyl)-4-oxo-1-phenyl-1,3,8-triazaspiro[4.5]decan-3-yl]-N-methylacetamide, 1.730A, P212121, Rfree=24.5%

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2014-07-09
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00000
Spacegroup nameP 21 21 21
Unit cell lengths62.042, 74.750, 75.080
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.826 - 1.730
R-factor0.195
Rwork0.192
R-free0.24540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.007
RMSD bond angle1.071
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_1730)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.8301.830
High resolution limit [Å]1.7301.730
Rmerge0.0870.832
Rmeas0.0980.023
Total number of observations226174
Number of reflections34598491
<I/σ(I)>11.271.1
Completeness [%]93.099.4
Redundancy5.746.53
CC(1/2)0.9991.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529311.3 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed 1.3:1 with 90mM MES/NaOH pH6.5, 0.18M potassium iodide, 0.2M Li2SO4, 22.5% PEG 4K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon