6FGI
Crystal Structure of BAZ2A bromodomain in complex with 3-amino-2-methylpyridine derivative 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-05 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 95.259, 95.259, 32.460 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.248 - 2.551 |
R-factor | 0.2125 |
Rwork | 0.211 |
R-free | 0.24150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mgj |
RMSD bond length | 0.003 |
RMSD bond angle | 0.640 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.630 | 47.630 | 2.660 |
High resolution limit [Å] | 2.550 | 8.830 | 2.550 |
Rmerge | 0.181 | 0.065 | 1.248 |
Rmeas | 0.191 | 0.069 | 1.316 |
Rpim | 0.061 | 0.023 | 0.416 |
Number of reflections | 5707 | 159 | 684 |
<I/σ(I)> | 9.8 | ||
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 9.7 | 9.4 | 9.8 |
CC(1/2) | 0.996 | 0.998 | 0.736 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 20% PEG3350, 0.2 M MgCl2 |