6EYO
Structure of extended IgE-Fc in complex with two anti-IgE Fabs
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-02-23 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.92 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 119.483, 119.601, 132.994 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 88.930 - 3.700 |
R-factor | 0.2496 |
Rwork | 0.247 |
R-free | 0.28820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wqr |
RMSD bond length | 0.002 |
RMSD bond angle | 0.510 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 88.930 | 4.050 |
High resolution limit [Å] | 3.700 | 3.700 |
Rmerge | 0.224 | 0.691 |
Rpim | 0.094 | 0.284 |
Number of reflections | 20732 | 4698 |
<I/σ(I)> | 6.8 | 2.8 |
Completeness [%] | 98.8 | 95.3 |
Redundancy | 6.6 | 6.8 |
CC(1/2) | 0.989 | 0.819 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 0.1M Tris-HCl pH8.0 and 45% (v/v) pentaerythritol propoxylate (5/4PO/OH) |