6EPK
CRYSTAL STRUCTURE OF THE PRECURSOR MEMBRANE PROTEIN-ENVELOPE PROTEIN HETERODIMER FROM THE YELLOW FEVER VIRUS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-09-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1. |
Spacegroup name | P 41 |
Unit cell lengths | 99.880, 99.880, 238.824 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.717 - 2.700 |
R-factor | 0.1628 |
Rwork | 0.162 |
R-free | 0.18630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3c5x |
RMSD bond length | 0.003 |
RMSD bond angle | 0.672 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | AMoRE |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.770 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.090 | 1.123 |
Rmeas | 0.111 | 1.394 |
Rpim | 0.063 | 0.814 |
Number of reflections | 63786 | 4469 |
<I/σ(I)> | 17 | 1.2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.4 | 5.1 |
CC(1/2) | 0.997 | 0.519 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 1.2 M Li2SO4, 100mM TrisHCl pH8 |