6EHQ
E. coli Hydrogenase-2 (as isolated form).
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.976 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 99.064, 100.090, 168.135 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 86.000 - 2.200 |
R-factor | 0.16365 |
Rwork | 0.162 |
R-free | 0.18951 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5a4m |
RMSD bond length | 0.013 |
RMSD bond angle | 1.526 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 86.000 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.190 | 0.980 |
Rpim | 0.120 | 0.630 |
Number of reflections | 93703 | 4242 |
<I/σ(I)> | 6.4 | 1.7 |
Completeness [%] | 95.8 | 95.5 |
Redundancy | 6.5 | 6.2 |
CC(1/2) | 0.978 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 100 mM Bis-tris pH 5.5 200 mM MgCl2 18-22% PEG 3350 |