6EE3
X-ray crystal structure of Pf-M1 in complex with inhibitor (6k) and catalytic zinc ion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-15 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.95370 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.960, 108.601, 118.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.401 - 1.820 |
R-factor | 0.1533 |
Rwork | 0.151 |
R-free | 0.19570 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.208 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.9) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.300 | 54.300 | 1.850 |
High resolution limit [Å] | 1.820 | 9.800 | 1.820 |
Rmerge | 0.182 | 0.057 | 0.996 |
Rmeas | 0.196 | 0.063 | 1.077 |
Rpim | 0.072 | 0.026 | 0.406 |
Total number of observations | 637254 | ||
Number of reflections | 87047 | 652 | 4363 |
<I/σ(I)> | 8.9 | ||
Completeness [%] | 100.0 | 98.7 | 99.3 |
Redundancy | 7.3 | 5.8 | 6.9 |
CC(1/2) | 0.993 | 0.993 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 22% (v/v) PEG 8000, 10% (v/v) glycerol, 0.1 M Tris pH 8.5, 0.2 M MgCl2 |