6E5S
Crystal structure of holo retinal-bound domain-swapped dimer Q108K:T51D mutant of human Cellular Retinol Binding Protein II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-08-17 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.0782 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.199, 73.792, 353.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.459 - 2.061 |
R-factor | 0.2234 |
Rwork | 0.222 |
R-free | 0.27350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2rcq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.139 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.2_869) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.460 | 2.130 |
High resolution limit [Å] | 2.061 | 2.061 |
Rmeas | 0.083 | 0.939 |
Number of reflections | 108095 | |
<I/σ(I)> | 22 | |
Completeness [%] | 91.9 | |
Redundancy | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | PEG 4000, sodium acetate, Ammonium acetate |