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6DTI

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]277
Detector technologyCCD
Collection date2010-08-17
DetectorADSC QUANTUM 315
Wavelength(s)0.97
Spacegroup nameP 41 21 2
Unit cell lengths404.540, 404.540, 176.620
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.343 - 3.540
R-factor0.1969
Rwork0.197
R-free0.23570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xnr
RMSD bond length0.005
RMSD bond angle0.855
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX (1.8.4_1496)
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.3433.670
High resolution limit [Å]3.5403.540
Rmerge0.0730.754
Number of reflections17171317375
<I/σ(I)>12.421.51
Completeness [%]97.1
Redundancy2.9
CC(1/2)0.9920.526
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5277MPD, NH4Cl, KCl, CaCl2, magnesium acetate, sodium cacodylate, pH 6.5 VAPOR DIFFUSION, HANGING DROP, temperature 277K, temperature 277.0K

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