Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DPI

Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 40 s at 21 C

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2015-02-24
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths81.620, 37.290, 62.382
Unit cell angles90.00, 96.98, 90.00
Refinement procedure
Resolution19.981 - 1.347
R-factor0.1465
Rwork0.145
R-free0.17370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDBID 1ZBL
RMSD bond length0.007
RMSD bond angle1.033
Data reduction softwareHKL-2000
Data scaling softwareAimless (0.5.31)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.98019.9801.370
High resolution limit [Å]1.3507.2501.350
Rmerge0.0250.0160.773
Rmeas0.0231.093
Rpim0.0160.773
Number of reflections400072661734
<I/σ(I)>16
Completeness [%]96.792.481.7
Redundancy1.91.81.8
CC(1/2)0.9990.375
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29414% PEG3350, 20% glycerol, 200 mM KI, and 25 mM CaCl2

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon