6DPI
Crystal Structure of Bacillus Halodurans Ribonuclease H1 K196A in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 200 mM Rb+ for 40 s at 21 C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-24 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.620, 37.290, 62.382 |
Unit cell angles | 90.00, 96.98, 90.00 |
Refinement procedure
Resolution | 19.981 - 1.347 |
R-factor | 0.1465 |
Rwork | 0.145 |
R-free | 0.17370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 1ZBL |
RMSD bond length | 0.007 |
RMSD bond angle | 1.033 |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.980 | 19.980 | 1.370 |
High resolution limit [Å] | 1.350 | 7.250 | 1.350 |
Rmerge | 0.025 | 0.016 | 0.773 |
Rmeas | 0.023 | 1.093 | |
Rpim | 0.016 | 0.773 | |
Number of reflections | 40007 | 266 | 1734 |
<I/σ(I)> | 16 | ||
Completeness [%] | 96.7 | 92.4 | 81.7 |
Redundancy | 1.9 | 1.8 | 1.8 |
CC(1/2) | 0.999 | 0.375 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 14% PEG3350, 20% glycerol, 200 mM KI, and 25 mM CaCl2 |