6DMM
Crystal structure of the G23A mutant of human alpha defensin HNP4.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-01-07 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.629, 65.894, 124.064 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.567 - 1.670 |
R-factor | 0.2198 |
Rwork | 0.218 |
R-free | 0.25310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zmm |
RMSD bond length | 0.011 |
RMSD bond angle | 1.320 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.700 |
High resolution limit [Å] | 1.670 | 1.670 |
Rmerge | 0.057 | 0.966 |
Rpim | 0.031 | 0.521 |
Number of reflections | 40384 | |
<I/σ(I)> | 28.8 | |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 4.2 | 4.2 |
CC(1/2) | 0.990 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 294 | 30% isopropanol 10% PEG 1500 200 mM lithium sulfate 100 mM sodium acetate pH 5.5 |