6DGE
Crystal structure of the dimethylarginine dimethylaminohydrolase adduct with N5-(1-imino-2-chloroethyl)-L-lysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9762 |
Spacegroup name | P 41 |
Unit cell lengths | 55.242, 55.242, 89.478 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.005 - 1.910 |
R-factor | 0.2166 |
Rwork | 0.215 |
R-free | 0.25070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3i2e |
RMSD bond length | 0.004 |
RMSD bond angle | 0.864 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.940 |
High resolution limit [Å] | 1.910 | 5.180 | 1.910 |
Rmerge | 0.072 | 0.031 | 0.500 |
Number of reflections | 20872 | 1079 | 1028 |
<I/σ(I)> | 10.3 | ||
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 7.5 | 7.4 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 277 | 20% PEG 3350 0.2 M NaCl |