6DG6
Structure of a de novo designed Interleukin-2/Interleukin-15 mimetic
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.730, 86.800, 92.310 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.276 - 1.999 |
R-factor | 0.205 |
Rwork | 0.204 |
R-free | 0.22610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | predicted model |
Data reduction software | XDS (20170601) |
Data scaling software | XSCALE (20170601) |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX (1.13-2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.276 | 39.276 | 2.050 |
High resolution limit [Å] | 1.999 | 8.940 | 1.999 |
Rmerge | 0.103 | 0.037 | 1.781 |
Rmeas | 0.109 | 0.040 | 1.900 |
Number of reflections | 40725 | 533 | 2918 |
<I/σ(I)> | 12.17 | 38.68 | 1.22 |
Completeness [%] | 99.6 | 96.7 | 98.1 |
Redundancy | 8.643 | 7.31 | 8.135 |
CC(1/2) | 0.999 | 0.999 | 0.544 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 2.4 M sodium malonate pH 7.0 |