6DB2
X-ray crystal structure of VioC bound to vanadyl ion, L-homoarginine, and succinate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-G |
| Synchrotron site | APS |
| Beamline | 21-ID-G |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-08-22 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 81.025, 66.637, 63.224 |
| Unit cell angles | 90.00, 109.47, 90.00 |
Refinement procedure
| Resolution | 59.610 - 1.700 |
| R-factor | 0.1765 |
| Rwork | 0.175 |
| R-free | 0.19950 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.189 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 59.610 | 50.000 | 1.730 |
| High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
| Rmerge | 0.045 | 0.018 | 0.532 |
| Rmeas | 0.053 | 0.021 | 0.626 |
| Rpim | 0.027 | 0.011 | 0.326 |
| Total number of observations | 130367 | ||
| Number of reflections | 34737 | 1793 | 1757 |
| <I/σ(I)> | 10.4 | ||
| Completeness [%] | 99.8 | 99.2 | 100 |
| Redundancy | 3.8 | 3.7 | 3.6 |
| CC(1/2) | 0.999 | 0.851 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 8.5 | 293 | 2-oxoglutarate, Tris-HCl |






