Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6D9R

The substrate-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-03-08
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 32 2 1
Unit cell lengths113.758, 113.758, 56.731
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution37.190 - 1.640
R-factor0.1668
Rwork0.166
R-free0.19620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6d9s
RMSD bond length0.010
RMSD bond angle1.223
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.1671.670
High resolution limit [Å]1.6401.640
Rmeas0.1371.376
Rpim0.0290.350
Number of reflections517502548
<I/σ(I)>31.09
Completeness [%]99.899
Redundancy21.514.4
CC(1/2)0.810
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.2 M ammonium acetate, 0.1 M sodium acetate trihydrate, pH 4.6, 30% PEG4000

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon