6CYZ
Mycobacterial homoserine kinase ThrB in complex with AMPPNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-05 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.350, 62.700, 84.630 |
Unit cell angles | 90.00, 104.40, 90.00 |
Refinement procedure
Resolution | 81.971 - 2.040 |
R-factor | 0.1989 |
Rwork | 0.197 |
R-free | 0.23480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wat |
RMSD bond length | 0.004 |
RMSD bond angle | 0.780 |
Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180319) |
Data scaling software | XSCALE (VERSION Jan 26, 2018 BUILT=20180319) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.13rc2_2975) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 81.971 | 81.971 | 2.090 |
High resolution limit [Å] | 2.040 | 9.120 | 2.040 |
Rmerge | 0.140 | 0.025 | 1.130 |
Rmeas | 0.164 | 0.029 | 1.355 |
Total number of observations | 137127 | ||
Number of reflections | 36994 | 444 | 2617 |
<I/σ(I)> | 9.5 | 37.7 | 1.08 |
Completeness [%] | 99.2 | 98.2 | 95.8 |
Redundancy | 3.707 | 3.45 | 3.206 |
CC(1/2) | 0.994 | 0.999 | 0.409 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 291 | 0.6 M sodium chloride, 0.1 M MES, pH 6.5, 20% PEG4000 |