6CMS
Closed structure of active SHP2 mutant E76K bound to SHP099 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-05-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 40.715, 54.141, 218.847 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.710 - 2.680 |
R-factor | 0.2107 |
Rwork | 0.205 |
R-free | 0.26510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dgp |
RMSD bond length | 0.002 |
RMSD bond angle | 0.511 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.950 | 2.830 |
High resolution limit [Å] | 2.680 | 2.680 |
Number of reflections | 14269 | 1936 |
<I/σ(I)> | 6.2 | 2.6 |
Completeness [%] | 99.3 | 94.9 |
Redundancy | 13.4 | 13.8 |
CC(1/2) | 0.981 | 0.874 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 291 | 100 mM bicine pH 9, 100 mM NaCl, 19 % PEG MME 550 |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 291 | 100 mM bicine pH 9, 100 mM NaCl, 19 % PEG MME 550 |