6CG2
Crystal Structure of KDM4A with Compound 8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-D |
Synchrotron site | APS |
Beamline | 14-BM-D |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2012-03-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.95 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.457, 101.739, 142.287 |
Unit cell angles | 90.00, 99.51, 90.00 |
Refinement procedure
Resolution | 140.300 - 2.340 |
R-factor | 0.1771 |
Rwork | 0.174 |
R-free | 0.23350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vgi |
RMSD bond length | 0.015 |
RMSD bond angle | 1.763 |
Data reduction software | XDS |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 140.330 | 2.480 |
High resolution limit [Å] | 2.340 | 2.340 |
Number of reflections | 67709 | |
<I/σ(I)> | 12.3 | |
Completeness [%] | 98.7 | |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% PEG4K, 150mM NaCl, 50mM HEPES pH 7.3 |