6CBP
Crystal structure of the single chain variable fragment of the DH270.6 bnAb in complex with the Man9-V3 glycopeptide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-10-27 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97925 |
| Spacegroup name | P 41 2 2 |
| Unit cell lengths | 68.005, 68.005, 128.835 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 60.141 - 2.170 |
| R-factor | 0.224 |
| Rwork | 0.221 |
| R-free | 0.27780 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5tqa |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.934 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 60.141 | 2.248 |
| High resolution limit [Å] | 2.170 | 2.170 |
| Number of reflections | 15878 | 5929 |
| <I/σ(I)> | 7.65 | |
| Completeness [%] | 95.1 | |
| Redundancy | 4.9 | |
| CC(1/2) | 0.982 | 0.417 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | 30% PEG8000, 10 mM CHES, 1 M sodium chloride, pH 9.0 |






