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6CBP

Crystal structure of the single chain variable fragment of the DH270.6 bnAb in complex with the Man9-V3 glycopeptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2016-10-27
DetectorADSC QUANTUM 315
Wavelength(s)0.97925
Spacegroup nameP 41 2 2
Unit cell lengths68.005, 68.005, 128.835
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution60.141 - 2.170
R-factor0.224
Rwork0.221
R-free0.27780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5tqa
RMSD bond length0.006
RMSD bond angle0.934
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.1412.248
High resolution limit [Å]2.1702.170
Number of reflections158785929
<I/σ(I)>7.65
Completeness [%]95.1
Redundancy4.9
CC(1/2)0.9820.417
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP929330% PEG8000, 10 mM CHES, 1 M sodium chloride, pH 9.0

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