6CAD
Crystal structure of RAF kinase domain bound to the inhibitor 2a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 85.493, 114.548, 55.599 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.583 - 2.550 |
R-factor | 0.2558 |
Rwork | 0.255 |
R-free | 0.27700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4r5y |
RMSD bond length | 0.002 |
RMSD bond angle | 0.496 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.583 | 2.700 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmeas | 0.150 | |
Number of reflections | 18363 | |
<I/σ(I)> | 10.5 | 0.6 |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 6.4 | 6.6 |
CC(1/2) | 0.557 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 30% PEG 3350, 0.1M Bis-Tris Propane pH 6.5, 0.2M Sodium Nitrate |