6C9C
Crystal structure of LpxC from Pseudomonas aeruginosa in complex with racemic ligand PT803
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-12-07 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.97872 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 35.660, 79.340, 50.920 |
| Unit cell angles | 90.00, 92.01, 90.00 |
Refinement procedure
| Resolution | 35.638 - 2.000 |
| R-factor | 0.1675 |
| Rwork | 0.162 |
| R-free | 0.21340 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5vwm |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.140 |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 35.638 | 35.638 | 2.050 |
| High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
| Rmerge | 0.098 | 0.026 | 0.563 |
| Rmeas | 0.113 | 0.030 | 0.662 |
| Total number of observations | 76737 | ||
| Number of reflections | 18652 | 219 | 1098 |
| <I/σ(I)> | 11.72 | 40.43 | 2.02 |
| Completeness [%] | 97.1 | 98.6 | 76.8 |
| Redundancy | 4.114 | 3.845 | 3.387 |
| CC(1/2) | 0.997 | 0.999 | 0.769 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.7 | 290 | tray296747a A10: 100 mM Tris-HCl, pH 8.5, 30% (w/v) Propanol, 30% (w/v) PEG 3350 +1mM ZnCl2, 1mM BSI108453 (PT803) : Cryo = 20%EG : PsaeA.00166.a.DG15.PD00471 at 5 mg/ml, puck qcu4-1 |






